Anaïs Bardet

Analyzing whole genome DNA methylation data? Our new method MethyLasso is out in NAR! It can help you identify regions with low or partial methylation (LMR, UMR, DMV, PMD, PMD) or differentially methylated regions (DMR) and was benchmarked against others doi.org/10.1093/nar/gk…

Happy to have contributed to this beautiful work from @evgenykvon lab!

Today, we - @stark_lab and @Eileen_Furlong lab (@EMBLheidelberg) - report the design of 40 synthetic enhancers for 5 tissue types in fruit fly embryos, in vivo. With only a few hundred enhancers per tissue for training, we adopt a stepping-stone transfer-learning approach: (5/N)

#ResultatScientifique🔎 | MethyLasso : un nouvel outil pour analyser les données de méthylation de l’ADN 🤝 @CNRS @CNRS_Alsace @IGBMC @INSERM ✍️ Anais Bardet 📕 @NAR_Open | buff.ly/3ZrrnrQ buff.ly/4eUnNuH

Moving on @abardet.bsky.social

Happy to share that I will now have my own group at @IGBMC working on computational regulatory genomics!

Summer School on Chromatin Biology is back in August at @‌HelmholtzMunich. Start your journey into state-of-the-art chromatin biology with #epigenetics experts @‌robert_ife @metorrespadilla and Aloys Schepers – apply by April 5 for the 2024 student cohort. bit.ly/42b8tFc

Looking for a postdoc to join my team @institutpasteur @CNRS @InstitutPrairie. The candidate will develop machine learning methods for single-cell omics data. Project funded by the #ERCStG MULTI-viewCELL

Next week !

🧬Opening for a postdoc in my group @NCMMnews @UniOslo @UniOslo_MED @unioslo_mn to generate deep learning models to enhance JASPAR @jaspar_db & UniBind, boosting gene regulation research. Project in collaboration with @anshulkundaje, @WyWyWa. Plz share jobbnorge.no/en/available-j…

New faculty position in Gene Regulation just posted at at Penn State! Come join the fantastic collaborative environment in the Center for Eukaryotic Gene Regulation ( cegr.psu.edu )! Review of applications starts Nov. 1st psu.wd1.myworkdayjobs.com/en-US/PSU_Acad…

Check out MethyLasso, our new method to identify DMRs, LMRs, UMRs and DMVs from WGBS data biorxiv.org/content/10.110…

Super thrilled for @ISMBinfo @ISCB_RegSys RegSys track starting today! 🔬💻 🎉 Two days of fantastic science await with an incredible lineup of speakers. 🌟 Join us in room Rhone 2 for a deep dive into regulatory systems genomics. #ISMBECCB2023 #RegSys

📢 Join us at ISMB/ECCB 2023 in Lyon from July 23-27! I wanted to share my excitement and encourage all of you in the scientific and computational biology community to join! See you there! invt.io/1txbcqry7sh #ISMBECCB2023 #ComputationalBiology #Conference #Lyon #Virtual

We are looking for a bioimage analyst to join our team at the IGBMC Imaging Centre. More details here forum.image.sc/t/looking-for-… or DM me. @NEUBIAS_ @RTMFM1 @GDR_ImaBio @IGBMC @RISE_micro @Fr_BioImaging #bioimageanalysis

For those interested in #germline_genes and #DNA_methylation, our paper with a systems view of germline genes regulation is out. @a_bardet @umr7242 academic.oup.com/nar/advance-ar…

Registration and early abstract submission now open for the next ISMB/ECCB meeting iscb.org/ismbeccb2023. Join us July 23rd to 27th in sunny Lyon to hear about all the most exciting computational biology youtube.com/watch?v=STfQSV… @ISMBinfo

📢 The call for applications for the position of #Director of the IGBMC is launched! The Institute is looking for a person to continue to promote the excellence of its #research on the international scene. All the info: bit.ly/3XrrkJv

Happy to share that I have been awarded an ANR JCJC grant (young researcher) to study TF binding in the context of chromatin !

Hey, there are PhD positions on Computational Biophysics available in my lab! Interested? #PhDpositions #ComputationalBiology #ComputationalBiophysics jobrxiv.org/job/igbmc-2777…