Yiliang Ding
@YiliangDing
Tenured Group Leader @JohnInnesCentre, Honorary Professor @uniofeastanglia, Honorary Group Leader @BabrahamInst. Working on RNA structure functionalities
Finally out! It has been a lot of fun working with AI scientists ( Dr Ke Li’s group @UniofExeter). It is just the beginning😊More interesting discoveries are on the way😉 @JohnInnesCentre @HaopengYu
NEWS - Breakthrough AI model can translate the language of plant life Plant RNA-FM, a pioneering Artificial Intelligence (AI) model able to understand the genetic “language” pattern of plants, has been launched @YiliangDing @UniofExeter okt.to/ClP4OI
A very important RNA structure study for determining conserved RNA regulatory switches across transcriptomes in vivo! @incaRNAtolab 👍👍👍
Identification of conserved RNA regulatory switches in living cells using RNA secondary structure ensemble mapping and covariation analysis go.nature.com/4lLtIX8
nature.com/articles/s4158… Wow this one is really cool. #ncRNA #switch #RNA
A resource of RNA-binding protein motifs across eukaryotes reveals evolutionary dynamics and gene-regulatory function go.nature.com/4mc1SmQ
Predicting the translation efficiency of messenger RNA in mammalian cells go.nature.com/4mgXR0C
Big congratulations 🎉 Super cool studies resolving transcriptome-wide RNA regulatory switches👍👍👍
I am so incredibly excited to share our latest work, on the exploration of #RNA secondary structure ensembles and discovery of RNA regulatory structural switches in bacteria and human cells, out today in @NatureBiotech: nature.com/articles/s4158…. A short tread! (1/n)
AI model can translate the RNA language of plant life buff.ly/4acS333 via @JohnInnesCentre #PlantScience
🚨New Forum podcast just dropped🚨 Barbara Cheifet speaks with Marie Lopez and Brian Hie about how foundation models are being used for analysis of the function and structure of DNA, RNA and proteins, and how they're being developed for clinical use shows.acast.com/forum/episodes…
Bering performs joint cell segmentation and annotation for spatial transcriptomics with transferred graph embeddings @Kang_Jin__ @JianShuLab #BiotechNatureComms nature.com/articles/s4146…
Congratulations to Alison Harrod, Gem Flint and Yuncheng Qian, our prize winners from the AlterNAT meeting! We hope everyone enjoyed an exciting day of talks on the identification and application of alternative multistranded nucleic structures #BiochemEvent @Biochem_Journal
Big congratulations 🎊
Attending #ISMB2025 and honored to be recognized as a Fellow of the International Society for Computational Biology (@iscb Class of 2025)
In 1h we discuss "Predicting cellular responses to perturbation across diverse contexts with State" from @arcinstitute in the reading group with the author @abhinadduri! biorxiv.org/content/10.110… Join us on zoom at 9am PT / 12pm ET: portal.valencelabs.com/starklyspeaking
New online! An evolutionary continuum between non-coding and coding DNA bit.ly/4m6Kz6F
Excited to preprint work mainly by former postdocs Li Feng, Yingnan Hou @Cerhou, and the phylogenomics genius @amiralito_ @TheSainsburyLab. We found a plant defense gene family enabling pathogen gene silencing & explored engineering this pathway to boost disease resistance!
A conserved small RNA-generating gene cluster undergoes sequence diversification and contributes to plant immunity biorxiv.org/content/10.110… #biorxiv_plants
m6A-induced ribosome stalling and collision trigger mRNA decay dlvr.it/TM2C4P
Calling all #RNA & #AI researchers! 🧬🤖 Submissions are open for the new open‑access collection “Exploring RNA Biology with Deep Learning Algorithms” in RNA Biology that I am guest editing with @YiliangDing 📄⬇️ michaelwolfinger.com/blog/2025/blog… #DeepLearning #bioinformatics #CompBio
@astar_gis teams up with @10xGenomics to revolutionize drug discovery for #TISHUMAP! Using AI & spatial biology, this project will analyze thousands of tissue samples to fast-track drug target discovery in cancer & inflammatory diseases. A major step toward precision medicine!…
Recruitment, rewiring and deep conservation in flowering plant gene regulation nature.com/articles/s4147…
Plant microRNA maturation and function | Nature Reviews Molecular Cell Biology nature.com/articles/s4158…
Undruggable ‘disordered’ proteins become druggable with new AI techniques from David Baker. @ScienceMagazine science.org/doi/10.1126/sc…
New Online! Plant microRNA maturation and function bit.ly/4lBKDeX