Tip
@Thidathipw
Instructor, Siriraj Long-read Lab (Si-LoL), Bangkok, Adjunct @UAMS, USA, Nanopore, metagenome, virus, bacteria, AMR, Cancer, http://longreadlab.com, coffee ☕️
#NAR #cover by @IntawatN & me :D @nanopore #RNA #ELIGOS @piroonj doi.org/10.1093/nar/gk…
Pharmacogenomics team at Faculty of Medicine Ramathibodi Hospital, Mahidol University
Advancing metagenomic classification with NABAS+: a novel alignment-based approach. #Metagenomics #Genomics #Bioinformatics #NARgenomicsAndBioinformatics academic.oup.com/nargab/article…
Happy to present the first complete genome of an Indian individual biorxiv.org/content/10.110…. Joint effort by @astar_gis ,FER, and partners, with support from the Singapore NPM programme! Joint effort with JJ Liu Lab! @msprasad693 and @JosipaLipovac as co-first authors.
PeGAS: A Versatile Bioinformatics Pipeline for AMR, Virulence and Pangenome Analysis. #AMR #PangenomeAnalysis #Genomics #Bioinformatics @BioinfoAdv academic.oup.com/bioinformatics… Github: github.com/liviurotiul/Pe…
A comparison of long-read single-cell transcriptomic approaches. #LongRead #SingleCell #Transcriptomics #ToolsBenchmarking #Genomics #Bioinformatics @biorxiv_bioinfo @AnitaScoonesPhd biorxiv.org/content/10.110…
DiffMethylTools: a toolbox of the detection, annotation and visualization of differential DNA methylation.#DNAmethylation #DifferentialMethylationAnalysis #Bioinformatics #Genomics @biorxiv_bioinfo biorxiv.org/content/10.110…
New online! Structural variants in the 3D genome as drivers of disease bit.ly/44FiIo5
Cleanifier: A fast and lightweight k-mer based tool to remove contamination in microbial sequence data. #MicrobialSequences #ContaminationRemoval #Kmers #Genomics #Bioinformatics @biorxivpreprint biorxiv.org/content/10.110…
Our first publication on P450 enzymes led by @PhaisanSuppalak has just been published. We identified and characterized a new CYP152 fatty acid decarboxylase from L. alkaliphilus. It has several unique structural characteristics. jbc.org/article/S0021-…
GW: ultra-fast chromosome-scale visualization of genomics data. #GenomeVisualization #Bioinformatics #Genomics @naturemethods nature.com/articles/s4159…
This testimonial highlights how @Thidathipw is using #nanopore technology to detect intra-amniotic infections. Read how the impact of targeted sequencing’s significant reduction in time to answer has future potential to reduce neonatal mortality: nanoporetech.com/resource-centr…
Long reads @nanopore @PacBio can provide insights into epigenetics. We (@fuyilei96 @timp0) summarize the latest #Bioinformatics approaches to analyze methylation & why this matters! Out now @NatureRevGenet bit.ly/4cjxUtl @BCM_HGSC @bcmgenetics @RiceCompSci @JohnsHopkins
@Thidathipw is driven to improve patient outcomes through addressing unmet needs. Explore why she is researching the rapid capabilities of nanopore sequencing technology to get answers with impact. bit.ly/3EJBkcI