Anand Mayakonda 🕉️ (@anand_mt)

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Introducing Grabstract. An AI tool that transforms your research texts into visuals. Please retweet and share 🙏

ggrabstract@grabstractio · May 5

Introducing grabstract: Transform complex scientific texts into clear, visual insights Just paste your abstract to create: 📊 Graphical abstracts 🖼️ Scientific posters 🌐 Mermaid diagrams 📈 Infographics Try it for free: grabstract.io #AcademicTwitter #SciComm

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grabstract@grabstractio · May 5

Introducing grabstract: Transform complex scientific texts into clear, visual insights Just paste your abstract to create: 📊 Graphical abstracts 🖼️ Scientific posters 🌐 Mermaid diagrams 📈 Infographics Try it for free: grabstract.io #AcademicTwitter #SciComm

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Etienne Sollier@EtienneSollier · Apr 4, 2024

Introducing figeno, my visualization software for (epi)genomics🧬🎨. Supports many data types (bigwig, HiC, @nanopore data with base modifications, WGS...) and is easy to use with a GUI. Can visualize multiple regions (e.g. for breakpoints). github.com/CompEpigen/fig…

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De-Chen Lin@dechen_lin · Mar 5, 2024

Big thanks to all the Reviewers and NIDCR! We are looking for passionate researchers to work with us on HNSCC!

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Anand Mayakonda 🕉️@anand_mt · Mar 4, 2024

Trackplot: a fast and minimal dependency R script for epigenomic enrichment plots academic.oup.com/bioinformatics… github.com/PoisonAlien/tr…

anand_mt's tweet image. Trackplot: a fast and minimal dependency R script for epigenomic enrichment plots

academic.oup.com/bioinformatics…

github.com/PoisonAlien/tr…

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Anand Mayakonda 🕉️@anand_mt · Nov 17, 2023

squaRify - A minimal, zero dependency package for drawing treemaps in R. Inspired by @laserson's squarify python implementation github.com/PoisonAlien/sq… #treemaps #rstats

anand_mt's tweet image. squaRify - A minimal, zero dependency package for drawing treemaps in R.

Inspired by @laserson's squarify python implementation

github.com/PoisonAlien/sq…

#treemaps #rstats

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Nature Genetics@NatureGenet · Mar 28, 2023

🚀 ONLINE @NatureGenet 📰 Neuroblastoma arises in early fetal development and its evolutionary duration predicts outcome 🧑🏽‍🤝‍🧑🏻 Verena Körber, Frank Westermann, Thomas Höfer, and team ⬇️ go.nature.com/3TR7aqW #neuroblastoma @NatResCancer

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Anand Mayakonda 🕉️@anand_mt · Mar 17, 2023

Extremely cool.

ggrabstract@grabstractio · May 5

Introducing grabstract: Transform complex scientific texts into clear, visual insights Just paste your abstract to create: 📊 Graphical abstracts 🖼️ Scientific posters 🌐 Mermaid diagrams 📈 Infographics Try it for free: grabstract.io #AcademicTwitter #SciComm

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Anand Mayakonda 🕉️@anand_mt · Feb 7, 2023

I've been meaning to advertise echtvar a bit more. Indeed it's oddly fast and pretty flexible for annotating with large databases. In the paper, we even encoded gene, transcript, impact for all possible SNPs (3 per position) and the archive is still small.

AAnand Mayakonda 🕉️@anand_mt · Feb 7, 2023

It’s unbelievable how fast #echtvar by @brent_p is. Annotating a whole genome vcf (5m vars) with gnomad and internal allele frequencies takes < 5mins. 🙌 github.com/brentp/echtvar

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Anand Mayakonda 🕉️@anand_mt · Feb 7, 2023

It’s unbelievable how fast #echtvar by @brent_p is. Annotating a whole genome vcf (5m vars) with gnomad and internal allele frequencies takes < 5mins. 🙌 github.com/brentp/echtvar

anand_mt's tweet card. using all the bits for echt rapid variant annotation and filtering - brentp/echtvar

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Supat Thongjuea (สุพัฒน์ ทองเจือ)@SThongjuea · Jan 4, 2023

We are seeking computational postdocs for single-cell genomics in cancer @DKFZ and @KiTZ_HD Please help RT Thank you nature.com/naturecareers/…

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De-Chen Lin@dechen_lin · Aug 25, 2022

Very excited to share our DNA methylome studies in esophageal cancer, a +5-year long journey with the amazing @benbfly and @yueyuan40704346, started @CSCancerCare and polished @CCMB_USC @uscnorris biorxiv.org/content/10.110…

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Anand Mayakonda 🕉️@anand_mt · Aug 18, 2022

All these years and I didn’t know that this existed! #samtools

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De-Chen Lin@dechen_lin · Jul 27, 2022

Join us this Friday (3-6PM, July 29th): 2022 USC Head and Neck Cancer Symposium. This event features leading figures in the field sharing new insights on both translational and basic research on head and neck cancer! We have both in-person and online options!

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Anand Mayakonda 🕉️@anand_mt · Jul 18, 2022

📊Rを使った美しい作図を紹介するプロジェクト。ggplot2やlatticeを使わずに標準の作図機能でやるのがすごい。 ggplot2とは違った綺麗さがあるなと感じます。自分もこのくらいできるようになりたいな〜

AAnand Mayakonda 🕉️@anand_mt · Jul 7, 2022

Do you like #Rstats and #Datavisualization? Follow @baseRgraphics where I tweet pretty plots (with code and data) generated using pure base graphics with no dependencies. This is for those who like to learn and customize base R plotting functions. #BaseisBeautiful :)

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Anand Mayakonda 🕉️@anand_mt · Jul 7, 2022

Do you like #Rstats and #Datavisualization? Follow @baseRgraphics where I tweet pretty plots (with code and data) generated using pure base graphics with no dependencies. This is for those who like to learn and customize base R plotting functions. #BaseisBeautiful :)

anand_mt's tweet image. Do you like #Rstats and #Datavisualization? Follow @baseRgraphics where I tweet pretty plots (with code and data) generated using pure base graphics with no dependencies.
This is for those who like to learn and customize base R plotting functions. #BaseisBeautiful :)

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Joschka Hey@HeyJosch · Jun 24, 2022

Amazing opportunity for an early-career researcher to become a computational group leader in the Division of Cancer Epigenomics at the German Cancer Research Center in Heidelberg. 👇

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Anand Mayakonda 🕉️@anand_mt · May 11, 2022

Somewhere near Kukke and Shiribagilu. Western ghats are truly mesmerizing.

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Anand Mayakonda 🕉️@anand_mt · May 11, 2022

Person maintaining this account is having fun with the alt text 😄

NNational Human Genome Research Institute@genome_gov · May 6, 2022

When you’re a cell that has to read the genetic code written in DNA so you can produce the molecule you need.

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Anand Mayakonda 🕉️@anand_mt · Apr 26, 2022

Oh wow! Just saw that our @genomeresearch article for the #maftools @Bioconductor package crossed over 1000 citations. Thanks to all the contributors and users for citing :) Just in time for Bioconductor 3.15 release, with support for CNV, and cancer hotspot report. @dechen_lin

anand_mt's tweet image. Oh wow! Just saw that our @genomeresearch article for the #maftools @Bioconductor package crossed over 1000 citations. Thanks to all the contributors and users for citing :)
Just in time for Bioconductor 3.15 release, with support for CNV, and cancer hotspot report. @dechen_lin

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