Saubashya Sur, PhD
@SaubashyaSur
Assistant Professor@Ramananda College, Bankura University; Expertise in Bioinformatics # Former Postdoc @liu_universitet @FU_Berlin @UmeaUniversity; Shutterbug
#CoVEXS5 features a unique version of the spike protein, which fuses protein elements from several coronaviruses into a single structure. This fusion helps the immune system recognize and respond to a broader range of virus types, not just one specific strain. 5/5…
PhWRKY30 boosts petunia's virus defense via SA pathway! #PetuniaVirusResistance @OxfordJournals Details: doi.org/10.1093/hr/uha…
New Research: Integrative multi-omics analysis reveals the interaction mechanisms between gut microbiota metabolites and ferroptosis in rheumatoid arthritis frontiersin.org/articles/10.33… #FrontiersIn #Immunology
"Precision engineering of human cytomegalovirus without BAC constraints: a Sendai virus-delivered CRISPR/Cas9 approach” Carmichael JC [..] Lee B. J Gen Virol. 2025-07-15. doi.org/10.1099/jgv.0.… #CRISPR-Cas9; SeV-Cas9; 80-90% editing efficiency
An NIH-funded study used a personalized gene-editing approach to help a baby born with a rare, often deadly disorder. This type of personalized gene therapy could one day help to treat a variety of disorders. bit.ly/4lGq4h6
TGF-β and IL-12 conversely orchestrate formation of CD103+ CD8 tumor-resident memory T cells to regulate response to therapeutic cancer vaccine cell.com/iscience/fullt…
"One of the most important things as a scientist is that you have to be an optimist. If you’re a pessimist, a failed experiment will tell you that the whole idea is bad and you’ll quit. When you fail you have to continue." - chemistry laureate Richard Henderson's advice.
Review "CRISPR-based therapeutic genome editing for inherited blood disorders" Levesque S, Bauer DE. Nat Rev Drug Discov. 2025-07-14. doi.org/10.1038/s41573… … discuss the challenges that remain for ex vivo and in vivo targeting of HSCs for next-generation gene therapies.
tailfinderR- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads. github.com/adnaniazi/tail…
AbAgym: A Well-Curated Dataset For The Mutational Analysis Of Antibody-Antigen Complexes A new dataset called AbAgym has been introduced, which is specifically designed for the mutational analysis of antibody-antigen complexes. This dataset is manually curated and contains…
The removal of probiotics represented by lactic acid bacteria can directly promote the occurrence of kidney stones sciencedirect.com/science/articl… Genetically modified gut bacteria show promise for combating kidney stones in clinical trial science.org/doi/10.1126/sc… medicalxpress.com/news/2025-07-g…
SAME: Spatial Alignment of Multimodal Expression: Topology-flexible transforms enable robust integration of multimodal spatial omics biorxiv.org/content/10.110…
STELLA: Self-Evolving LLM Agent for Biomedical Research biorxiv.org/content/10.110…
Learning the native-like codons with a 5'UTR and secondary RNA structure aided species-informed transformer model biorxiv.org/content/10.110… #biorxiv_bioinfo
“Higher resolution pooled genome-wide CRISPR knockout screening in Drosophila cells using integration and anti-CRISPR (IntAC)" Viswanatha R [..] Perrimon N. Nat Commun. 2025-07-15. doi.org/10.1038/s41467…
🎊August's issue is live! go.nature.com/46WkxOW 💊Preclinical and clinical antibacterial pipelines with global health perspectives 🦠Microbiota in IBD ⚖️Commensalism and pathogenesis of C. albicans 🌱Building climate-resilient agriculture through science and local action
Meet the RCSB PDB at ACA 75 #aca2025 Join us for posters, presentations, and more at the 75th annual meeting of the American Crystallographic Association Details: pdb101.rcsb.org/news/6841b401e…
Evaluating a SNP calling pipeline for Mycobacterium leprae biorxiv.org/content/10.110… #biorxiv_genomic
Due to rising seawater temperatures, vibrio vulnificus bacteria are becoming increasingly common in the Baltic Sea, the Black Sea, and other European waters dailymail.co.uk/health/article… Here's how to protect yourself from potentially dangerous vibriosis tagesschau.de/wissen/gesundh…
Deep Learning-Enabled Scaffolding Of Spatial Arrays Of PfCSP Epitopes In a significant advancement for vaccine development, computational biologists have successfully utilized generative deep learning models to precisely scaffold multiple malaria vaccine epitopes. This…