James Manton
@JamesDManton
Applied physicist & optical microscopist/microscopologist
I have two job adverts open at the minute: - A PhD position on fast MLIPs for biomolecules (www2.mrc-lmb.cam.ac.uk/students/inter…) - A postdoc position on developing a universal molecular mechanics force field (nature.com/naturecareers/…) Feel free to get in touch with questions.
An interesting alternative to iterative deconvolution — just sample from the posterior and average the samples!
Check out our "Richardson-Lucy without Iteration Cutoffs: Physically Motivated Bayesian Deconvolution" 🔬 bandpass integrated in physics-based fashion to avoid overfitting thru SNR regimes. arxiv.org/abs/2411.00991 Fully parallelized code here: github.com/LabPresse/Baye…
Interested in working on a state-of-the-art connectomics pipeline at its birthplace as a postdoc? We’d love to hear from you! :) mrc.tal.net/vx/mobile-0/ap…
Two available postdoc scholarships at Norlin Lab in Lund! 1. Optical Engineering: OPM/light-sheet microscopy and lensless imaging jobrxiv.org/job/lund-unive… 2. Flexible Position: Related to spatial-omics method development or LLMs for life science research. Email/DM if interested
A nice use of multispectral microscopy to study the organelle signatures of neurons and astrocytes in 2D+t and 3D! I look forward to playing with the data they've generously made available at ebi.ac.uk/biostudies/Bio….
Preprint alert! Led by Shannon Rhoads, we used 🌈🔬 to elucidate the #organelle signatures of #neurons and #astrocytes at baseline and in response to neurodegenerative-disease associated stressors. See Shannon's awesome tweetorial below! biorxiv.org/content/10.110…
Following a poke from @RunningPhoton, I've fixed a bug in my KL divergence calculation function which means our parameter-free deconvolution approach now *really* has no hand-tuned parameters at all: beryl.mrc-lmb.cam.ac.uk/rlgc_notebook/ Feedback always welcome. x.com/JamesDManton/s…
We (@AndrewGYork, @RunningPhoton, @microRussell and I) are still working on the manuscript describing our automatic parameter-free deconvolution approach, but we've made a Google Colab notebook where you can try it out without needing to install anything: beryl.mrc-lmb.cam.ac.uk/rlgc_notebook/
If you find these kind of incisive scientific discoveries - fluorescence microscopy is not cat photos - interesting then please come and work with me on the project! Details here, deadline 11 November -> kcl.ac.uk/jobs/097465-po…
Beware of applying computer-vision metrics to microscopy image of biological samples. At best, you fool only yourself. @SuperResoluSian #I2K2024 #BioImageAnalysis
Our lab @MRC_LMB is seeking a passionate PhD student to explore transcription-coupled splicing! Join our team for an exciting project to understand human gene regulation 🧬 Feel free to get in touch directly #PhD #cryoEM #biochemistry
Thanks to @royalsociety and @MRC_LMB, @lab_baum and I are looking for a student to develop the next generation of fluorescent proteins for live and super-resolution imaging, as part of the LMB's four-year PhD programme. www2.mrc-lmb.cam.ac.uk/students/inter…
Beware of applying computer-vision metrics to microscopy image of biological samples. At best, you fool only yourself. @SuperResoluSian #I2K2024 #BioImageAnalysis
Congratulations to @_Akaash_Kumar for being awarded the Royal Microscopical Society's Early Career Award for his PhD work on multispectral imaging! biorxiv.org/content/10.110… x.com/RoyalMicroSoc/…
Big congrats to Akaash Kumar @_Akaash_Kumar who emerged as our Early Career Award-winner! 👏👏👏🔬🔬🔬 A tough job for our judges after such a brilliant range of talks from our shortlisted speakers. #microscopy #EarlyCareer