Nils Homer
@nilshomer
Moved to Bluesky: http://bsky.app/profile/nilshomer.com "So long and thanks for all the fish"
Join us @fulcrumgenomics! Nowhere else can you have access to so many diverse and challenging #Bioinformatics and #Engineering problems across so many clients and domains: ‣ 10+ 5 year clients ‣ 100+ projects completed ‣ 50+ clients served
We're hiring @fulcrumgenomics! We're looking for an experienced bioinformatician to join our team and work on exciting projects in technology development and biomedical research. If you're interested in becoming part of our team, drop us a line here: fulcrumgenomics.com/careers/
I’ve landed at #ISMB2024/#ISMB. Come say hello or drop me a line if you want to meet.
If you don't show up to meetings, straight to Jail. We have the best attendees in the world... youtube.com/watch?v=eiyfwZ…
A lot of bioinformatics requires editing sequencing reads to facilitate QC and make them suitable for processing. To help with such tasks, @DelaneyKSull developed splitcode, now published at academic.oup.com/bioinformatics… 1/
We still have a long way to go… #genomics #ancestry #dog #genetics
Build your own #Bioinformatics language they said. It's time to retire fulcrumgenomics/dagr to the Ättestupa. While it only ran workflows locally, it had support for many cool features that still many "modern well-behaved" workflow DSLs do not have. github.com/fulcrumgenomic…
3/4🧵@jasonnfan from @fulcrumgenomics delved into the power of Groovy in #Nextflow workflows. 💻 By modeling sample sheets and metadata with Groovy classes, they enhanced workflow safety and clarity. A great talk on leveraging Groovy for more robust pipelines! 🔍 #Groovy
To name but a few, @nilshomer from @fulcrumgenomics walked us through a clear example of how the growth of Nextflow is not only powered by academics and researchers, but also by industry colleagues, with the example of nf-core/fastquorum, a pipeline directly developed by…
I am also making "Good Progress" on my nanopore sequencer...
3/5 🧵 @nilshomer from @fulcrumgenomics presented Fastquorum, an #nfcore Nextflow pipeline for UMI-based consensus sequencing. This tool enhances sequencing accuracy by leveraging unique molecular identifiers, crucial for low-frequency variant detection and error correction. 🧬
New nf-core pipeline out last night from @fulcrumgenomics
Happening now! @nilshomer sharing fastquorum, @fulrumgenomics’ new pipeline and contribution to the wonderful #nfcore community. #Nextflow #NextflowSummit.
We are proud to have sponsored the #Nextflow Summit Hacksthon (Boston 2024). @jasonnfan was there representing us. Don’t miss his talk tomorrow!#Bioinformatics #Genomics
Beautiful view while landing (safely) in #Boston for the #Nextflow Summit. Come find me tomorrow at our booth. #Bioinformatics #Genomics
