Steven Ge

Excited to launch DataMap – a portable, browser-based tool for generating heatmaps and PCA & tSNE plots. No installs. No servers. Your data never leaves your device. ✔️ Interactive heatmaps, PCA, and t-SNE ✔️ Transform & normalize data on the fly ✔️ Upload CSV, TSV, Excel +…

MoH A new malnourished infant has died of malnutrition consequences resulted from the lack of food and baby formula banned by the Israeli occupation from entering Gaza!

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In just 48 hours, at least four children have reportedly died of starvation. Over 100 people have died from malnutrition during this war, and 80% of them are children. “These deaths are unconscionable - and could have been prevented. The UN-led humanitarian response must be…

I will present on AI-powered data science platforms on Monday, July 21, at 11 am EST at the Univ of Virginia. Zoom link: kohl.aaec.vt.edu/events/data-sc…

The pan-cancer proteome atlas, a mass spectrometry-based landscape for discovering tumor biology, biomarkers, and therapeutic targets dlvr.it/TLyB5j

Genomes doubles in some cancer cells nature.com/articles/s4158…

I authored a customer story for the Databricks blog! Shout out to my Data and AI team for their hard work, and collaborative efforts with the various teams at Pathnostics to achieve these efforts. databricks.com/blog/why-pathn…

Hype distorts priorities. Cancer research focuses on therapies benefiting <2% of patients, while prevention, nutrition, and toxicology are ignored. Pharma’s influence looms large. 6/

No MSA? 🔥 No problem🔎 PLAME turns ESM-2 embeddings into virtual MSAs, HiFiAD-filters them and lifts pLDDT +5 on zero-shot CASP14 targets AlphaFold2 accuracy at near-ESMFold latency🔥

🧬 Excited to open-source Biomni! With just a few lines of code, you can now automate biomedical research with AI agent! We are releasing Biomni A1 (agent) + E1 (env) with 150 specialized tools, 59 databases, and 105 software. E1 is our first attempt at curating the bio-agent…

New #Rstats blog post: Plot Data Along a Genome with karyoploteR. Demos: genome density, per-base coverage, structural variation, GWAS Manhattan plots, combine multiple data types, gene expression results from DESeq2, epigenetic regulation from ENCODE doi.org/10.59350/dqsa7…

Simons Foundation AutismResearch 2025 Data Analysis — Request for Applications share.google/VDmpChekb1XboH…

Aging has a major impact on protein ubiquitylation. This is mediated in part through reduced proteasome activity and can be modulated by diet.

The Big Beautiful Bill allocates $100 B to the DARPA for casualty care research aimed at reducing death & injury from trauma (combat + civilian). If you are a biomedical scientist stressed about funding, consider it. DoD funds basic research, too. I found that out by using…

This is an absolute page-turner, at least for me. All 120 pages of it! This summer has been 🔥 for #AI4Science. We have 1000+ members in our alphaXiv community. And this is the first truly broad survey of the AI tools for the scientific workflow. Very nice @wjqdev! paper:…

What's in the Big Beautiful Bill? I made a simple chatbot! You can ask questions, and AI will answer based on the 500-page document. Ask for summaries or explanations. See the impact on different groups. Kids are off to sleepovers. I'm home alone, bored to tears. ☺️ Vibe…

Mass Layoffs in top universities. Terrible for new graduates

Please repost: Two tenure-track positions in Applied Mathematics and Statistics in my department at South Dakota State University. Come join us! Assistant Professor of Applied Mathematics: yourfuture.sdbor.edu/postings/44020 Assistant Professor of Statistics: yourfuture.sdbor.edu/postings/44018

Just wrapped up Data Science Camp with 20 amazing high schoolers! We taught a crash course in R and how to use ChatGPT to build web apps. All materials and student projects (mostly games) are available via the link below. I designed activities to demonstrate how to use ChatGPT…