Ram Bhaskara
@RamBhaskara4
Researcher/ Team leader in Computational Biology & Biophysics, Heartfulness Trainer.
GoGoGoGoGoGoGoMartini3 now finally published! nature.com/articles/s4146…
All scientists must condemn what happed in Kashmir. It is a plan to divide, and create instability, which will not succeed if social communities outside religion are vocal collectively. Condolences to the families who lost their loved ones forever. #PahalgamTerroristAttack
MartiniGlass: a Tool for Enabling Visualization of Coarse-Grained Martini Topologies | Journal of Chemical Information and Modeling pubs.acs.org/doi/10.1021/ac…
Martini 3 - IDP is out! Improved parameters for disordered proteins, great work from Liguo Wang: nature.com/articles/s4146…
Just dropped on bioRxiv! Our team has assembled a data-driven map of the human E3 ligome. Check out our preprint! #E3_ligome #ubiquitination #dataIntegration #metriclearning biorxiv.org/content/10.110…
Students often get lost in complex frameworks of biology. Our animated lessons simplify concepts, saving time and clearing misconceptions! Learn more at smart-biology.com #biology #3D #science #EdTech
Fantastic collaboration. Thanks to @grumati @sfb1177 and @KateLohachova
Finally our manuscript is out! Thanks to everyone who put hands on this. Congrats to all. If you like ER and muscle take a look at the article! embopress.org/doi/full/10.10…
Find out how the switching between receptor isoforms governs ER morphology changes during Myogenesis. Great collaboration with @grumati, and thanks to @sfb1177 embopress.org/doi/full/10.10…
🔔 Registration deadline approaching! Don't miss out and secure your spot now! 🔗 fcqc.de #FCQC2025
#FCQC2025: Registration open fcqc.de Join us for a high-caliber line-up of talks on quality control mechanisms & networks, the interplay of autophagy & ubiquitin in health & disease, novel therapeutics using the ubiquitin system. #proteostasis #autophagy
We often think of an "equilibrium" as something standing still, like a scale in perfect balance. But many equilibria are dynamic, like a flowing river which is never changing—yet never standing still. These dynamic equilibria are nicely described by so-called "detailed balance"
Check out how we used simulations and single molecule FRET to determine how a invasion bacterial protein activates a plasma membrane receptor to enter our cells. Kudos to @serena_arghittu and @gabriel_hella, and great collaboration with @HeilemannLab nature.com/articles/s4146…
I’m thrilled to share that my latest research paper has been published in PNAS! 📄 pnas.org/doi/10.1073/pn… A big thank you to all the co-authors 🙏 @RamBhaskara4 @KateLohachova @iDikic2 @HummerLab. Thanks to @IBC2_GU @BMLS @EnableFrankfurt @sfb1177 @dfg_public
Congratulations to all co-authors. Amazing effort connecting molecular interactions to tumor immune surveillance
Excited to share our latest research on the role of the #autophagy-lysosome system in tumour progression! We identified #IRGQ as a key regulator of MHC-I QC and potential target for cancer therapy #cancer #immunotherapy @FCI_health @EnableFrankfurt sciencedirect.com/science/articl…
🚨Checkout our new publication from @IBC2_GU @goetheuni to learn how IDRs amplify membrane remodeling during ER-phagy. Dive into our findings here: pnas.org/doi/10.1073/pn… @EnableFrankfurt @sfb1177 🔬 @SCALE_Uni_FFM @HummerLab @DikicLab
Shoutout to Hull University Library for fabulous time management tips.
Really happy that our paper on solving the crystallographic phase problem using neural networks is out in @ScienceMagazine. Thanks to @mol_crystal_guy and @AndersOMadsen for a great collaboration. science.org/doi/10.1126/sc…
An incredible talk by Anand Srivastava @mbuanand followed by a nice dinner with colleagues in Frankfurt. Anand’s insights on PH domain-membrane binding is truly inspiring and left us all motivated! Thabks to @IBC2_GU @EnableFrankfurt and @sfb1177.
Our @J_Cell_Sci at a glance on mammalian pexophagy is online now. Huge thank you to my PhD student Justyna Bajdzienko @sfb1177 @IBC2_GU for mastering this project together! 😎🙌 #peroxisomes, #autophagy, #ubiquitin tinyurl.com/dpjrexjn
We are excited to announce the publication of high confidence 3D template matching for #cryoET @HummerLab @Beck_Laboratory @jpkreysing @geissler_katha @s_l_schaefer @pc_hoffmann @MPIbp @cziscience Paper's link: nature.com/articles/s4146… See it in action in our short video!
Fresh online: an extensive tutorial chapter on how to build and simulate complex membranes with Martini 3. Many examples, from simple bilayers to realistic multi-component membranes and curved systems. Free download until end of May. authors.elsevier.com/a/1iuzfHRzCT-Yo