Peter C. Allen
@PeterAllen225
Postdoctoral Researcher in the @drjosephpowell lab at @GarvanInstitute using sc-omics to understand various ILDs | @crepulmfibrosis Fellow | Views are my own
Calling all researchers interested in developing better tools for understanding cellular dynamics across time in single cell experiments. We’re hosting the Oz Single Cell Hackathon 9-10 Dec in Sydney. Fill out EOI before 10 Oct! Travel awards available docs.google.com/forms/d/e/1FAI…
Check out our latest work, introducing SAIGE-QTL, a new robust and scalable method for single-cell eQTL mapping! Tweetorial by the amazing @weizhouw👇
Excited to share our latest preprint introducing SAIGE-QTL, a powerful tool for single-cell eQTL analysis! Check it out here: medrxiv.org/content/10.110… #eQTL #scRNAseq #genomics (1/9)
Delighted to share our preprint on mapping the genetic association with intra-individual variability of gene expression. We introduced a new statistical framework to identify single-cell variance eQTL and applied it to OneK1K cohort. biorxiv.org/content/10.110…
Poster sessions in full swing. Looking forward to a full day of Oz Single Cells 2025 tomorrow. #ozsinglecell2025 @CellularFutures
🧬Oz Single Cell Hackathon 2025🧬 Join us at the Uni of Sydney 19-21 May before the Oz Single Cell conference! Join us to tackle challenges in scMultiomics integration, viz & predictive modeling. Details 👉 petercallen.github.io/2025-OSC-hacka… #OzSingleCell #ozsinglecell25 @ozsinglecells
Time's running out to submit an expression of interest for the 2024 @ozsinglecells hackathon in Sydney Dec 9-10! Will use Scale Bio data from stem cell-derived cardiomyocytes to develop tools for temporal dynamics. Don't miss out, submit an EOI by Oct 15: docs.google.com/forms/d/e/1FAI…
Save the date! Yes, it’s happening, the next Oz Single Cell conference will be held in Sydney, 23rd - 25th May 2025. More details to follow soon. #OSC2025
🔬🚀Inspiring the next generation of scientists! 👏#DayofImmunology high school visit with 💻'Intro to Bioinformatics', 🥼'Lab coats & life lessons', 🧪 'Careers in immunology' 👩🔬& in the wet lab for 'Biobanking' #STEMeducation @GarvanInstitute @UNSW @CellularFutures
The Garvan Institute and Illumina are partnering on the $27 million TenK10K project to help transform the treatment of complex diseases, starting with autoimmune diseases. @illumina @illuminainc @drjosephpowell Find out more: ow.ly/Pwrc50Rt2BL
My first conference after moving to Australia was definitely one to remember! Great talks & posters and phenomenal people #GenomeEra #ozsinglecell23
Thrilled to share a new chapter in my journey! I've accepted a postdoc role in the @drjosephpowell lab at @GarvanInstitute in Sydney, Australia, where I'll use single cell transcriptomics to study complex diseases like interstitial lung disease. Here's to the next adventure!
Check out @NatureRevGenet's focus issue on single-cell omics, including our recent review on the intersection of single-cell genomics and human genetics 😍 nature.com/articles/s4157…
Our August 2023 issue is now live! In this Focus issue (go.nature.com/3pYr3Sf) and its accompanying collection (go.nature.com/3Q59gn9), which includes older reviews, we highlight the exciting developments in single-cell omics and their transformative potential
Single-cell transcriptomics using long-read sequencing quantifies both gene and isoform expression in haematopoietic stem and progenitor cells, providing novel insights into the understanding of alternative splicing in cellular differentiation @earlhaminst nature.com/articles/s4200…
OneK1K data from Yazar et al (science.org/doi/10.1126/sc…) is now on the Human Cell Atlas Data Coordination Platform. 1.27m PBMC cells from ~1,000 donors. @humancellatlas @cziscience @ScienceMagazine data.humancellatlas.org/explore/projec…
An expert committee urges researchers to adopt scientifically precise terms to describe ancestry in their studies. scim.ag/1Zh
Incredibly excited to share out latest work using single cell RNA sequencing to identify eQTLs across 38 cell types in primary human lung tissue. biorxiv.org/content/10.110… 1/n
Mark your calendars! @genome_gov is celebrating #DNADay23 on April 25 in a BIG way this year, as it’s also the 20th anniversary of the Human Genome Project completion & 70 years since the DNA double helix was discovered! Join them for the celebration: genome.gov/event-calendar