Xin Li
@xinlee0
Computational Biophysics, cancer evolution, embryonic development, molecular machine
With @ThirumalaiArmy and @tienhung_91, we wrote a review on 'Minimal Models for RNA Simulations', now published in @COSB_CRSB. We highlight how coarse-grained models capture the complex behaviour of RNA, from ribozyme folding to phase separation and more. doi.org/10.1016/j.sbi.…
Controlling the morphologies and dynamics in three-dimensional tissues from @ThirumalaiArmy @Rajsekhar810 @Sinhon2030 biorxiv.org/content/10.110…
On the control of cell proliferation | PNAS pnas.org/doi/10.1073/pn… @ThirumalaiArmy @Rajsekhar810 #Proliferation #Mechanical #Feedback #CIP
Congratulations to Dave Thirumalai, recipient of the 2025 @APSphysics Max Delbrück Prize in Biological Physics! @ThirumalaiArmy cm.utexas.edu/news/entry/dev…
Excited to share our new work:"Rotational migration in human pancreatic ductal organoids depends on actin and myosin activity" from @ThirumalaiArmy collaborated with @IriantoLab. #CellBiology #Organoids #PancreasResearch biorxiv.org/content/10.110…
Devarajan Thirumalai to Receive Biophysical Society’s 2025 Founders Award ow.ly/RQXw50Tuw5C @davethirum @UTAustin
Excited to share our new paper: "Emergence of cellular nematic order is a conserved feature of gastrulation in animal embryos" with @ThirumalaiArmy, @Jbwallingford, @peiferlabunc, @GetYourChorion, Jessica, @RobertJHuebner1. Read it here: biorxiv.org/content/10.110…. #devbiol #nematic
Proliferation-driven mechanical feedback regulates cell dynamics in growing tissues biorxiv.org/cgi/content/sh… #biorxiv_biophys
In @eLife: Structural basis for the preservation of a subset of topologically associating domains in interphase chromosomes upon cohesin depletion doi.org/10.7554/eLife.…. #3Dgenome. Another eLife paper from @ThirumalaiArmy @dv_jeong @anyuzx.
Free volume theory explains the unusual behaviour of viscosity in a non-confluent tissue during morphogenesis. elifesciences.org/articles/87966…
We are excited to share that our recent work on understanding the unusual dependence of viscosity on cell packing fraction observed in an experiment has been published in eLife. More details are in the following thread.@ThirumalaiArmy @xinlee0 doi.org/10.7554/eLife.…
In @eLife: Free volume theory explains the unusual behavior of viscosity in a non-confluent tissue during morphogenesis doi.org/10.7554/eLife.… -final version.@ThirumalaiArmy
Congratulations Dr. Davin Jeong for successfully defending her PhD!! @dv_jeong studied interphase chromosome structures with MD simulations and data-driven methods. Read up on her work here biorxiv.org/content/10.110…
A noninvasive imaging technique can track the motion of single biomolecules in live cells. Learn more in Science ⬇️ 📄: scim.ag/22g 📄: scim.ag/22k #SciencePerspective: scim.ag/22j