R2:Online Genome Analysis & Visualization Platform

Seamlessly explore the samples spread over more than 2,750 public data resources (including TCGA, Depmap, GTEx). Delve deeper into your research questions with a few clicks that enable inter-connected follow-up analyses and visualizations. r2platform.com

New public resource in the open online R2 data science platform for biomedical researchers (r2platform.com). 'Comprehensive profiling of RNAs enriched in small extracellular vesicles of colorectal #cancer patients' #colorectalcancer #genomics

New public resource in the open online r2platform.com Trajectory analysis reveals an uncommitted neuroblastic state in MYCN-driven #neuroblastoma development

The R2 platform : Democratizing bioinformatics through an easily accessible public online software platform for non-experts in the field of Genomics r2.amc.nl #genomics #datascience #expertise #fair #public #science #bioinformatics #nocode

New datascope in R2: r2platform.com/TPCPA "The pan-cancer proteome atlas, a mass spectrometry-based landscape for discovering tumor biology, biomarkers, and therapeutic targets" by Jaco Knol in Cancer Cell #dataviz, #proteomics, #datascience, #cancer

youtu.be/VHvlHiACXTU The absolute basics of R2 open online data #Science application for biomedical researchers in 7 minutes.

Explore the expression of NUCKS1 in TCGA & GTeX in the open online R2 data #science platform for biomedical researchers. 2700+ public resources can be queried instantly. R2 also has data driven embeddings of many data sets (incl. parameter sweeps for umap) r2.amc.nl

See the evolution of #gencode transcript isoforms in the Gencode Time Machine track within the embedded genome browser of the R2 open online data #science platform for biomedical scientists (r2.amc.nl). R2 also allows you to display many more annotation sources.

If you are looking for some R2platform pictures to add to your presentation of usage in (social media) posts, then have a look at this collection of images that you are welcome to use r2platform.com/media/

Explore data-driven embeddings, e.g. UMAP, tSNE on more than 2500 public resources in the 'sample maps' tool of R2. This is just one of the many avenues R2 has to offer for scientists. R2: open online data science platform for biomedical researchers (r2.amc.nl)

The power of cell phase synchronized chipseq. Beckman et al describe cell-phase specific binding patterns of ASCL1 that are not observed in unsynchronized samples. Explore the data also in the open online R2 data #Science platform for biologists r2.amc.nl

New datascope in R2: r2platform.com/TPCPA "The pan-cancer proteome atlas, a mass spectrometry-based landscape for discovering tumor biology, biomarkers, and therapeutic targets" by Jaco Knol in Cancer Cell #dataviz, #proteomics, #datascience, #cancer

A short youtube demo on single cell rnaseq data in the open online R2 genomics analysis and visualization platform youtu.be/DANq3zaFVk4 nocode point and click data science for biomedical researchers

Another view on DepMap from a data driven angle. Just one of the ways by which you can explore any resource in the open online R2 genomics analysis and visualization platform (r2.amc.nl). #dataviz #Analytics

with more than 350 publicly available neuroblastoma data sets, the R2 platform (r2.amc.nl) remains the worlds biggest resource for neuroblastoma data mining. And, it's also easy to use as a biomedical researcher. Instantly explorable #usabledata

Visualize public genomics data with ease in the open online R2 platform (r2.amc.nl). the interactive highly customizable graphics makes hypothesis testing a breeze. 2700+ public data sets instantly explorable 2900+ pubmed citations to date #dataviz

Want to do data science, but not ready to dive into coding? Have a look at the open online R2 genomics Analysis and Visualization Platform (r2.amc.nl). R2 is designed to be operated by biomedical researchers and requires no coding or bioinformatics expertise.

Find differential gene expression in #TCGA prostate cancer or dozens of other prostate cancer resources in the R2 open online data science platform (r2.amc.nl) e.g. Gleason score

#MultiOmics representations of 1000+ colorectal cancer (CRC) samples (WGS, RNAseq) Explore them in the open online R2 genomics analysis and visualisation plaform for biomedical researchers (r2.amc.nl). Dozens of implemented data science tools 2900+ pubmed citations

New datascope in R2: One of the most comprehensive studies on the impact of preanalytical variables on cell free RNA profilles. Assessment of RNA purification methods and blood collection tubes in 456 extracellular transcriptomes. @NatureComms #exRNAQC r2platform.com/exRNAQC/