Ozren Bogdanovic

New lab preprint - an awesome collaboration with @jjtenagu lab and @A_RuizHerrera and @malmuedocas labs is just out - check out the regulatory dynamics of zebrafish spermatogenesis 👇

New preprint from the Lab at @cabimer. We present PLAMseq, using TurboID to do like ChIPseq and proximity proteomics in the same protocol with extra powers like mapping protein interactions in the genome. biorxiv.org/content/10.110…

Ever wondered how sperm are formed? Spermatogenesis is a microscopic marathon that starts in the testes and ends with fully functional sperm! Our new preprint biorxiv.org/content/10.110… takes a deep dive into zebrafish spermatogenesis, mapping out every fascinating step. 🧵👇 1/7

This preprint is now published with some key additions guided by an excellent review process @NAR_Open. Also grateful to our collaborators for helping progress this one across the finish line! @suscla1 @qianthefirst @Yael_David__ @zhouwanding and others! academic.oup.com/nar/advance-ar…

1/ Can we control how cells sense external stimuli by modulating their epigenetic states? 🧬🧪 Our latest study shows that targeted DNA methylation editing can shape cell fate & inflammatory responses in immune cells-now out in @ScienceAdvances! 👇 science.org/doi/10.1126/sc… 🧵:

We're hiring! Need a microscopy wizard to help build the world’s first synthetic plant chromosome! Bring your lights, lasers, & lens-craft to characterise new artificial chromosomes. Join our ARIA-funded project at @uwanews in Perth & @plants4space. Apply: bit.ly/3GKSRSA

I am grateful to receive a @ZonMw PSIDER TOP grant to investigate differences during human female and male pre-/peri-implanatation stages, using blastoids. A 2y postdoc position (from Aug/Sep; possible extension) will open soon, feel free to contact me! projecten.zonmw.nl/nl/project/sex…

Save de date! Join us at @cabimer on October 17th for the @GenomaHubCSIC Workshop in "Genome Dynamics in Development and Disease". Slots available for talks! Registration opens soon!!

SWARM (Single-molecule Workflow for Analysing RNA Modifications) detects pseudouridine, m6A, and m5C on individual molecules from direct RNA nanopore signals (in both chemistries RNA002 and RNA004) github.com/comprna/SWARM see more on poster P2-396 at #rna2025 #RNA25 #RNAmods

Finally out in Nature our collaboration with the Velten Lab 🥰 Enjoy the reading! nature.com/articles/s4158…

A triumph of perseverance from twitterless Tom Weber, Christine Biben and the team, our in vivo barcoding "LoxCode mouse" used to resolve epiblast fate to fetal organs is finally published in @CellCellPress and available to import through @jacksonlab sciencedirect.com/science/articl…

Magnificent talk today at #CABDseminars by Dirk Schüleber! Dirk explained the studies of his team understanding how transcription factors work as sensors and modifiers of chromatin. Prof. Schübeler was hosted by @bogdanoviclab, one of the first lab members. Thanks for coming!

Great pleasure to host @SchubelerLab this Friday - if in the Seville area, please join for what promises to be an incredible seminar!

Introducing cornetto, an adaptive genome assembly paradigm using @nanopore adaptive sampling. - greatly reduces cost per genome assembly - reference agnostic, so works for non-humans - assembly just using saliva - & many more Relies on 2 excellent software #readfish & #hifiasm.

First seen in Biorxiv and now published and updated with more data in @NatureComms. With this work we have further enhanced CRISPR-Cas RNA targeting in vivo using transient approaches such as RNP or mRNA-gRNA in zebrafish embryos as vertebrate model. nature.com/articles/s4146…

Excited to share our #multiomics study of who was the world's #oldest living person! Our research on this record-breaking #supercentenarian suggests that, under certain conditions, #aging and #disease can become decoupled—challenging the common belief that they are inherently…

🚨 New paper alert 🚨 Our Human Microglia Atlas (HuMicA) characterizes #microglia subpopulations across 6 distinct #neurologic diseases. @RMartinsFerr @calafell_p @CarrerasIJC nature.com/articles/s4146…

Thrilled to share our milestone collaboration with Alán Aspuru-Guzik, Alex Zhavoronkov, Insilico Medicine, and our teams at UofT and the UAE! Using quantum computing to design KRAS inhibitors brings the future of drug discovery closer. Excited for what’s next!

📣 Hiring, please forward widely!! Two postdoc openings to work on genomics of diabetes 1. computational regulatory genomics/statistical genetics. 2. Experimental cell-based modeling DM if interested @CRGenomica shorturl.at/O3wMi shorturl.at/ieyZy

Great highlight of our work but it is big team effort. I can’t take full credit for it :) onconaut.ai/about