Dr. Bernadette Stolz

🚨OPEN PhD position🚨 I am looking for a highly motivated PhD student to join my project group in the Department of Machine Learning and Systems Biology @MLSB_Borgwardt led by @kmborgwardt at @MPI_Biochem near Munich. Deadline November 15th. Please RT.

If you’re at #SMB25 and curious to learn about novel geometrical and topological techniques for data-driven modeling, don’t miss our minisymposium (co-organised with @dbhaskar92)! Speakers: @kfbenjamin Veronica Ciocanel Robert McDonald Nan Wu Eunbi Park @tangjianpku

Excited to be back at #SMB2025! Edmonton is stunning this time of year. Been a member of @SMB_MathBiology since 2020 - it's one of my favorites, always try to attend in person if possible. This year I'm co-organizing a minisymposium with @StolzBernadette: 2025.smb.org/MFBM/MS-MFBM-1…

New preprint with @StolzBernadette and Darrick Lee - Communities in the Kuramoto Model: Dynamics and Detection via Path Signatures. Oscillators coupled through SBM reduce to a few variables captured by lead matrices, allowing for structure recovery! 👉arxiv.org/abs/2503.17546

Machine learning for model parameterization: mathematical-oncology.org/blog/machine-l… @hamiscalculated @jmetzcar @StolzBernadette #MathOnco #MachineLearning

Had a wonderful time at BIRS this week. Thank you @SBruningk @ReneeBradyPhD and Kathleen Wilkie for organising such a great and productive workshop! Now looking forward to @JointMath in Seattle

Join us for an exciting session @JointMath tomorrow! Here is our revised schedule!!

Thanks for the great responses regarding the foundation of #AI-LIFE last week! We now invite PIs from academia & industry to join #AI-LIFE as new members. Please follow the application procedure described below #ArtificialIntelligence #LifeSciences ai-life.cc 1/4

Very pleased to share that MuSpAn (Multiscale Spatial Analysis), @MuSpAn_Tweets, our Python package for quantitative spatial biology, has landed! Take a look at the preprint on bioRxiv now

MuSpAn: A Toolbox for Multiscale Spatial Analysis biorxiv.org/cgi/content/sh… #biorxiv_cellbio

Today, we are excited to announce #AI-LIFE, a new network at the interface of #ArtificialIntelligence and the #LifeSciences. The mission of #AI-LIFE is to foster research, training and international collaborations in these domains. Visit: ai-life.cc for details.

1/ new paper in PNAS (link at end) led by @irishryoon -- @chadgiusti, greg henselman-petrusek, yiyi yu, spencer lavere smith & i tackle a key challenge in TDA: how do you match topological features across populations or datasets? 🧠🔗

🍂🍂Nuevo Seminario de Otoño 2024 IMUS🍂🍂 🗓️"Topology for spatial data from oncology and neuroscience" 🗣️Bernadette Stolz @StolzBernadette , @MPI_Biochem 🗓️15/11/2024 🕛 12,00 h 🏫Seminario II @imus_us Más información 👇 imus.us.es/www/#actividad…

We are hiring a PhD student to join us to work on computer vision / multi-modal learning in Munich @TU_Muenchen @MunichCenterML. More info: portal.mytum.de/jobs/wissensch… 🗓️ Apply by: November 30th Feel free to reach out if you have any questions, and to RT! 📌 #PhDposition

My lab is again recruiting PhD students through this year's @ELLISforEurope call - apply by November 15 #MachineLearning #Bioinformatics @MLSB_Borgwardt @MPI_Biochem

Here is a recent paper in #BulletinMathBio by @StolzBernadette, Jagdeep Dhesi, @JoshuaABull, @haharrington, Helen Byrne, & @irishryoon on "Relational Persistent Homology for Multispecies Data with Application to the Tumor Microenvironment". link.springer.com/article/10.100…

Combining advanced machine learning techniques with topological data analysis can have interesting results. #TDA #GNN

Today is my first day at the Max Planck Institute of Biochemistry @MPI_Biochem. Absolutely thrilled to be starting my own group in the Department of Machine Learning and Systems Biology @MLSB_Borgwardt

We're searching for a research group leader in topological data analysis! @mpicbg @csbdresden @tudresden_de These are wonderful independent positions to start a research group in mathematics for the life sciences. Deadline is October 4th. Please share! bit.ly/3YYAU9M

If you are at @ecmtb2024 and want to know more about the role of macrophages in gliomas progression and their interaction with radiotherapy, come to my talk "A Mathematical Approach for Tumor-Associated Macrophages in Glioma Growth and Response to Radiation" in Room 10.6 at 16:40