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ShuttLab@MitoMORPH · Jan 24

Finally, through collaborations, we show that the reporter works in budding yeast (with Francesco Padovani @frank_pado in Kurt Schmoller's lab @SchmollerLab) and in Drosophila (Mashiat again, with help from Abhi Sharma in Savraj Grewal's lab @SavrajGrewal).

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Kurt Schmoller@SchmollerLab · Jan 16

It really does work amazingly!

KKurt Schmoller@SchmollerLab · Jan 15

mt-Kaede-HI-NESS @MitoMORPH is such an amazing reporter for mitochondrial DNA, and it works beautifully in budding yeast too! Check out the updated preprint to learn more: doi.org/10.1101/2023.1… @frank_pado @AlissaFinster

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Kurt Schmoller@SchmollerLab · Jan 15

mt-Kaede-HI-NESS @MitoMORPH is such an amazing reporter for mitochondrial DNA, and it works beautifully in budding yeast too! Check out the updated preprint to learn more: doi.org/10.1101/2023.1… @frank_pado @AlissaFinster

SShuttLab@MitoMORPH · Oct 30, 2023

I want to follow up on our recent preprint introducing a new genetic fluorescent mtDNA nucleoid reporter. biorxiv.org/content/10.110…

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Francesco Padovani@frank_pado · Dec 22

🚨 New segmentation model alert! 🚨🥳 You can finally use InstanSeg in our #BioImageAnalysis software #CellACDC! InstanSeg is a fast and multi-channel cell segmentation model by @petebankhead, Thibaut Goldsborough, & co. The multi-channel ability is very interesting!

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FocalPlane@focalplane_jcs · Nov 29

Our preprint list is now up on FocalPlane. This week we focus on research in #bioimageanalysis. Drop us a message if we’re missing any preprints that you’ve been reading or writing! focalplane.biologists.com/2024/11/29/mic…

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Kurt Schmoller@SchmollerLab · Nov 27

Best end to the incredible PhD journey! So proud, and grateful to everyone involved along the way!

TThe EMBO Journal@embojournal · Nov 19

Cover & highlight #22 by @osman_lab N&V on senescence/p21 & the path to fibrosis Commentary on PIWI & RNAs and… CEP192 localises mitotic Aurora-A activity DELE1 maintains muscle proteostasis Carboxy-terminal polyglutamylation regulates Dishevelled LLPS … embopress.org/toc/14602075/4…

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Kurt Schmoller@SchmollerLab · Nov 27

Seeing mitochondrial network on a lot of yeast cells on the cover of a prestigious journal makes me very happy 😎

TThe EMBO Journal@embojournal · Nov 19

Cover & highlight #22 by @osman_lab N&V on senescence/p21 & the path to fibrosis Commentary on PIWI & RNAs and… CEP192 localises mitotic Aurora-A activity DELE1 maintains muscle proteostasis Carboxy-terminal polyglutamylation regulates Dishevelled LLPS … embopress.org/toc/14602075/4…

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Physiological Reviews@physiolrev · Nov 19

Cell size matters, and it's a major regulator of cell function. @SchmollerLab reviews size control strategies of eukaryotic cells & the intricate link of cell size to intracellular biomolecular scaling, organelle homeostasis, cell cycle progression. 🔬ow.ly/k5Sa50U9ZQx

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MokranjacLab@MokranjacLab · Nov 15

The boss in action at the 6th Munich Yeast Meeting!✨️ Thanks to @SchmollerLab and @HamperlLab for organising such a great meeting! #Yeast #Mitochondria

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Kurt Schmoller@SchmollerLab · Nov 10

To leverage the breathtaking progress of AI approaches for experimental biology, we need to bridge the gap between conceptual method development and application in real-life image analysis. We are happy to now be part of the great @bioimageio initiative with SpotMAX @frank_pado

FFrancesco Padovani@frank_pado · Nov 10

🚀🎉SpotMAX is now a proud community partner of @bioimageio, the model zoo where you can find awesome pre-trained segmentation models! PS: You won't get the fireworks on the BioImage.IO website but feel free to request them on the SpotMAX GUI 😎

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Kurt Schmoller@SchmollerLab · Nov 10

While you could already use BioImage IO models in SpotMAX, by becoming a partner we commit to contribute with our pre-trained models, tutorials, etc. If you don't know what #SpotMAX is you can catch up on my previous Twitter thread here x.com/frank_pado/sta…

FFrancesco Padovani@frank_pado · Oct 25

SpotMAX, our software tool for analysing multi-dimensional microscopy data, is finally out! 🎉 And conveniently, I just presented it at the #I2K conference 😀 A multi-year-long effort of many great collaborators and users. But what can SpotMAX do? A small thread

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Volodymyr Nechyporuk-Zloy@vnzloy · Nov 2

SpotMAX: a generalist framework for multi-dimensional automatic spot detection and quantification Francesco Padovani et al doi: doi.org/10.1101/2024.1…

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Soni Deshwal@DeshwalSoni · Nov 4

I am very happy to announce that I will be joining @HelmholtzMunich as a group leader from January 2025. Looking very much forward to work with my new colleagues on Ferroptosis and mitochondria #ERCStg @ERC_Research @Conrad_Lab Fabiana Perocchi @SchmollerLab @NatalieKrahmer

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Kurt Schmoller@SchmollerLab · Nov 1

🎉One of our successful #epigenetics postdocs, @ATvardovskiy, is opening his own lab at @Penn! 🚨And he IS HIRING! Visit his lab website @PennEpiInst: tvardovskiylab.org & stay tuned for upcoming #academicpositions at all levels. Congratulations & best of luck, Andrey!

AAndrey Tvardovskiy@ATvardovskiy · Oct 31

📢 JOB ALERT: Tvardovskiy Lab at @PennEpiInst is hiring at all levels! Interested in chromatin biology, quantitative proteomics, or epigenetic modifications? Learn more about our research and apply at tvardovskiylab.org Please RT

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Andrey Tvardovskiy@ATvardovskiy · Oct 31

📢 JOB ALERT: Tvardovskiy Lab at @PennEpiInst is hiring at all levels! Interested in chromatin biology, quantitative proteomics, or epigenetic modifications? Learn more about our research and apply at tvardovskiylab.org Please RT

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bioRxiv Cell Biology@biorxiv_cellbio · Oct 23

SpotMAX: a generalist framework for multi-dimensional automatic spot detection and quantification biorxiv.org/cgi/content/sh… #biorxiv_cellbio

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Kurt Schmoller@SchmollerLab · Oct 25

Oh, wow!Another #PrePrintAlert! Congratulations to @frank_pado, his supervisor @SchmollerLab & col. from IFE at Epigenetics @HelmholtzMunich!! A great #researchtool is now freely available to quantify spots from your #microscope #imaging. Read the fantastic 🧵from 1st author

KKurt Schmoller@SchmollerLab · Oct 25

You want to analyze your cells and need to quantify spots? But you don't want to develop your own pipeline from scratch or click on spots manually? @frank_pado and #spotmax have you covered! doi.org/10.1101/2024.1…

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Francesco Padovani@frank_pado · Oct 25

If you use SpotMAX, do not hesitate to contact us for any issues, questions, or feedback you might have! GitHub: github.com/SchmollerLab/S… Documentation: spotmax.readthedocs.io/en/latest/ Preprint: shorturl.at/EQHJA Ground-truth dataset: shorturl.at/e6r3R

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