Cai Lab
@LongCai_Lab
The Cai Lab at Caltech. We developed sequential FISH (seqFISH), seqFISH+, MEMOIR, and RNA SPOTs, apply them to study various biological questions.
Our new preprint with S.Yoshida and B.Simons! Led by @ChakraArun, we leverage spatial information to resolve temporal dynamics in spermatogenesis! biorxiv.org/content/10.110… Also check out a complementary preprint by S.Y. and B.S using live imaging! biorxiv.org/content/10.110… (1/10)
Just posted a preprint on our new spatial genomic recording system, baseMEMOIR. biorxiv.org/content/10.110… Motivation: Cells divide, differentiate, and migrate to form exquisitely organized tissues. Reconstructing the dynamic histories of individual cells, including their lineage…
Check out Giotto Suite — our latest tool for spatial multiomics analysis. This is a complete overhaul of the original Giotto package, a result from years of making. Great collaboration with @RnDries team. Kudos to @jiaji_g_chen @josschavezf1 and the entire Giotto team!
Our dedicated Giotto team, led by the amazing @jiaji_g_chen & @josschavezf1 from the @RnDries and @gc_yuan labs, created a modular suite of R packages that can represent and analyze virtually any dataset.